Assay ID dbSNP JSNP 'Entrez Gene' Gene Name 'Entrez Gene' Gene Symbol SNP Type Public Location Chromosome Public Location Position Caucasian Minor Allele Frequency African American Minor Allele Frequency Chinese Minor Allele Frequency Japanese Minor Allele Frequency Celera RefSNP ID context sequence Chinese Minor Allele Japanese Minor Allele
C___8931102_1Y rs804774 　 protocadherin 11 Y-linked|protocadherin 11 X-linked PCDH11Y|PCDH11X Intron Y 4625140 0.26 0.15 0.16 0.23 hCV16030990 TAGAATGGATTGAGGGAGGGTGACTTCTTGGAACTAGATC[A/G]CTCTATTAATTATTTATGTTGTGTAGAGATATTGCGACAT G G
C__15936051_1Y rs2196155 　 protocadherin 11 Y-linked|protocadherin 11 X-linked PCDH11Y|PCDH11X Mis-sense Mutation Y 4627960 　 　 0.35 0.27 hCV15987694 GACTTGTTGTCCGGGACGTACATTTTCGCGGTCCTGCTAG[T/C]ATGCGTGGTGTTCCACTCTGGCGCCCAGGAGAAAAACTAC T T
C___2414646_2Y rs159663 　 protocadherin 11 X-linked PCDH11X 　 Y 5308874 　 　 0.16 0.24 hCV16040971 CAGTGATGATTCAATTAAAGTCATTCCTTTGACAACCTTC[A/G]CTCCACGCCAACAGGCCAGACCGTCCAGAGGTGATTCCCC A A
C__16040971_10 rs2556900 　 ubiquitously transcribed tetratricopeptide repeat gene, Y-linked UTY Intron Y 14535416 　 　 0.23 0.33 hCV2307216 TTTTATATCTATTACTATTACATATATTAATAAGAAGTCA[C/T]GTAACGAGATGTTTTAAGTTCTGAATATTTTACCATATAT A A
C__15987694_10 　 　 Jumonji, AT rich interactive domain 1D (RBP2-like)|Smcy homolog, Y chromosome (mouse) JARID1D|SMCY 　 Y 20812497 0.21 0.36 0.23 0.33 hCV2259382 CACCAGCAAAGGTAGCTGCAACTCAGGCAAAGTGAGAGAT[A/G]AGATTTTTGTACATAACCTTAGGAAGAGAGCTGAATCCAG G G
C__16030990_10 rs2524433 　 　 　 　 Y 21510446 　 　 0.23 0.36 hCV15936051 TTGAGTCTTACAGACTGGTTTAGGTTTGAAGTTTTTCTCT[G/A]TTAGGCTTTTGTGCTGAAGATATTGCCTTTGGGATTACAG A A
C___2259382_1Y rs2032652 　 variable charge, Y-linked, 2 VCY2 Intron Y 23983860 　 　 0.1 0.3 hCV2414646 GCAGATGACATTTGGACCTACACCTTTCCCAGGAACCTTT[G/A]TGATTTTACTCTTGTGTCCTAACAGGTTCTCGGAAGTGAT T T
C___2307216_1Y rs2032665 　 　 　 　 Y 26695080 　 　 0.4 0.31 hCV8931102 AATACATGTTTAGTAATATGTAATATTACTTTTATTCTTA[G/A]ATGTTTGCACAGATCTGATTAGTTGACTAAATTTTGGCCT A G